ncRNA ID | novel_bna_miR1189 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA3:36260144-36260329 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR2015555 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUAUGGAGUGAGGUUGGAGAUGCC - 24 |
Stem-loop(if miRNA) |
--          A                  C            AUA                  A                C      - UA   CAUCUCCAAC UCACUCCAUAUUUUACUC AAAAUUGAGAAA   GAGUGGGAAAUGGAGUGA GAACAAAAAAUAAAAG AUUACU C  U   |||||||||| |||||||||||||||||| ||||||||||||   |||||||||||||||||| |||||||||||||||| |||||| |  A   GUAGAGGUUG AGUGAGGUAUAAAAUGAG UUUUAACUCUUU   CUCAUCCUUUACCUCAUU CUUGUUUUUUAUUUUC UAAUGA G  A CC          G                  A            GAC                  A                C      A UA |
Stem-loop sequence | CAUCUCCAACAUCACUCCAUAUUUUACUCCAAAAUUGAGAAAAUAGAGUGGGAAAUGGAGUGAAGAACAAAAAAUAAAAGCAUUACUCUAUAAAUGAAGUAAUCCUUUUAUUUUUUGUUCAUUACUCCAUUUCCUACUCCAGUUUCUCAAUUUUAGAGUAAAAUAUGGAGUGAGGUUGGAGAUGCC |