| ncRNA ID | novel_bna_miR1188 |
| Species | Brassica napus |
| Class | miRNA |
| Genome position | ChrA3:40175199-40175264 [-] |
| Reference genome | Brassica_napus_assembly_v1.0 |
| Source | SRR2015555 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AAGAGACGGUUUCUUAUAUUCUGC - 24 |
| Stem-loop(if miRNA) |
--GA G UU AAUAUAAGAAACCG UUCUUAACUUUU A |||||||||||||| |||||||||||| UUAUAUUCUUUGGC GAGAAUUGAAAA G CGUC A UU |
| Stem-loop sequence | GAAAUAUAAGAAACCGGUUCUUAACUUUUUUAGUUAAAAGUUAAGAGACGGUUUCUUAUAUUCUGC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_013825681.1 |
|
1.5 | PREDICTED: Brassica napus peroxiredoxin-2E, chloroplastic-like (LOC106385780), mRNA | peroxiredoxin-2E, chloroplastic-like(LOC106385780) | coding protein | psRNATarget | |||||||||
| XM_013828335.1 |
|
3.0 | PREDICTED: Brassica napus transcription factor PIF4 (LOC106388298), mRNA | transcription factor PIF4(LOC106388298) | coding protein | psRNATarget |