ncRNA ID | novel_bna_miR1183 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA10:18087022-18087085 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR2015555 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAGAGAGAGUCCGACUCGAUGGU - 24 |
Stem-loop(if miRNA) |
--      --A             UAACUCUCU   UAUCGA   GGGCUCUCUCUCU         C   ||||||   |||||||||||||   GUAGCU   CCUGAGAGAGAGA         U UG      CAG             CUUUCUAUG |
Stem-loop sequence | UAUCGAAGGGCUCUCUCUCUUAACUCUCUCUGUAUCUUUCAGAGAGAGAGUCCGACUCGAUGGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013809636.1 |
|
2.5 | PREDICTED: Brassica napus probable E3 ubiquitin-protein ligase ARI7 (LOC106369488), mRNA | probable E3 ubiquitin-protein ligase ARI7(LOC106369488) | coding protein | psRNATarget | |||||||||
XM_013811193.1 |
|
2.5 | PREDICTED: Brassica napus probable E3 ubiquitin-protein ligase ARI5 (LOC106371155), mRNA | probable E3 ubiquitin-protein ligase ARI5(LOC106371155) | coding protein | psRNATarget |