ncRNA ID | novel_bna_miR1182 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC9:1750212-1750297 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363495 |
Length | 23 |
Mature sequence(if miRNA) | 1 - GGAUCGAAUCUGGAUCUCGGAUA - 23 |
Stem-loop(if miRNA) |
--    -             -  --UC     AUA         UC   UCCG GAUCCGGAUUCGG CC    UCUGG   UCCGGAUUU  G   |||| ||||||||||||| ||    |||||   |||||||||  G   AGGC CUAGGUCUAAGCU GG    AGGCC   AGGCCUAGG  A AU    U             A  CACU     ---         CU |
Stem-loop sequence | UCCGGAUCCGGAUUCGGCCUCUCUGGAUAUCCGGAUUUUCGGAUCGGAUCCGGACCGGAUCACGGAUCGAAUCUGGAUCUCGGAUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013838949.1 |
|
3.0 | PREDICTED: Brassica napus uncharacterized LOC106398383 (LOC106398383), mRNA | uncharacterized LOC106398383(LOC106398383) | coding protein | psRNATarget |