ncRNA ID | novel_bna_miR1180 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA2:9337075-9337141 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR2015555 |
Length | 24 |
Mature sequence(if miRNA) | 44 - AGAAGACUCUUGGAAGACUCUCAG - 67 |
Stem-loop(if miRNA) |
--        C          C  A    AA   U   AGAAGACU UUGGAAGACU UC GAAG  UCU G   |||||||| |||||||||| || ||||  |||   UCUUCUGA AGCUUUCUGA AG CUUC  AGA G CG        -          A  A    --   A |
Stem-loop sequence | AGAAGACUCUUGGAAGACUCUCAGAAGAAUCUUGGAAGACUUCAGAAAGUCUUUCGAAGUCUUCUGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013830034.1 |
|
2.5 | PREDICTED: Brassica napus callose synthase 9-like (LOC106389707), mRNA | callose synthase 9-like(LOC106389707) | coding protein | psRNATarget |