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BaseInfo

ncRNA ID	novel_bna_miR1177
Species	Brassica napus
Class	miRNA
Genome position	ChrA2:15184883-15184945 [+]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR1363496
Length	24
Mature sequence(if miRNA)	1 - AAGCUAGAUGAACUUCCAACCUAA - 24
Stem-loop(if miRNA)	--   C     GAACUU    -  UAAA    A   AAG UAGAU      CCAA CC    ACAA U   ||| |||||      |||| ||    |||| U   UUC AUCUA      GGUU GG    UGUU U UA   U     ---AUU    A  UGAA    A
Stem-loop sequence	AAGCUAGAUGAACUUCCAACCUAAAACAAAUUUAUUGUAAGUGGAUUGGUUAAUCUAUCUUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013804947.1	ncRNA:24   AAUC---------CAACCUUCAAGUAGAUCGAA   1   ||=|---------|||||||||||=|||||||* targets:465   UUGGAAUCAAAUCGUUGGAAGUUCGUCUAGCUG   497 Target Full Sequence	2.5	PREDICTED: Brassica napus bifunctional protein FolD 4, chloroplastic (LOC106365527), mRNA	bifunctional protein FolD 4, chloroplastic(LOC106365527)	coding protein	psRNATarget
XM_013861345.1	ncRNA:24   AA-U-CCAACCUUCAAGUAGAUCGAA   1   ||-|-||*||||||||||||||*||| targets:1713   UUCAUGGAUGGAAGUUCAUCUAUCUU   1738 Target Full Sequence	2.5	PREDICTED: Brassica napus probable xyloglucan glycosyltransferase 5 (LOC106420501), mRNA	probable xyloglucan glycosyltransferase 5(LOC106420501)	coding protein	psRNATarget