ncRNA ID | novel_bna_miR1171 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA1:23452483-23452561 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363496 |
Length | 23 |
Mature sequence(if miRNA) | 1 - UUAGAGUAGAAAAUAGAGUGAUA - 23 |
Stem-loop(if miRNA) |
--                               -----   U   UCACUCUAUUUUUUACUCUAAAAUAGAGUAU     GAG U   |||||||||||||||||||||||||||||||     |||   AGUGAGAUAAAAGAUGAGAUUUUAUCUCAUG     CUC U AU                               GUAAC   G |
Stem-loop sequence | UCACUCUAUUUUUUACUCUAAAAUAGAGUAUGAGUUUGCUCCAAUGGUACUCUAUUUUAGAGUAGAAAAUAGAGUGAUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013841080.1 |
|
1.0 | PREDICTED: Brassica napus phosphoinositide phosphatase SAC1-like (LOC106400708), mRNA | phosphoinositide phosphatase SAC1-like(LOC106400708) | coding protein | psRNATarget |