ncRNA ID | novel_bna_miR1170 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC4:55843645-55843798 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363496 |
Length | 24 |
Mature sequence(if miRNA) | 131 - AGGAUUUAUUCAAGGGUUUAGGGU - 154 |
Stem-loop(if miRNA) |
--          A                      C    U        A       -----    AAU     AG       CCUAAACUCU GGAUAAAUCUUAAACUCUAAAU AAAA CACUAAAC CUAAAAC     ACUC   GGUUU  GGUUU   |||||||||| |||||||||||||||||||||| |||| |||||||| |||||||     ||||   |||||  ||||A   GGAUUUGGGA CUUAUUUAGGAUUUGAGAUUUA UUUU GUGAUUUG GAUUUUG     UGGG   UUAGG  UUAGG UG          A                      U    -        G       AGAUU    -AU     AU     |
Stem-loop sequence | CCUAAACUCUAGGAUAAAUCUUAAACUCUAAAUCAAAAUCACUAAACACUAAAACACUCAAUGGUUUAGGGUUUAGGAUUUAGGAUUUAGGGUUUAGAGUUUUAGGGUUUAGUGUUUUUAUUUAGAGUUUAGGAUUUAUUCAAGGGUUUAGGGU |