ncRNA ID | novel_bna_miR1166 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC4:33132910-33133007 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363496 |
Length | 22 |
Mature sequence(if miRNA) | 1 - CCACGGAUCACCAAGACACACG - 22 |
Stem-loop(if miRNA) |
--   C     A -C    -      C  AG    ------------     A    A   CCA GGAUC C  AAGA CACACG AA  UACC            UAAAG UUCA G   ||| ||||| |  |||| |||||| ||  ||||            ||||| ||||   GGU CUUGG G  UUCU GUGUGC UU  GUGG            GUUUC AAGU A UG   -     C AA    U      -  --    UUUGACAGAGAA     G    U |
Stem-loop sequence | CCACGGAUCACCAAGACACACGCAAAGUACCUAAAGAUUCAAGAUUGAAGCUUUGAAGAGACAGUUUGGUGUUCGUGUGUUCUUAAGCGGUUCUGGGU |