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BaseInfo

ncRNA ID novel_bna_miR1165
Species Brassica napus
Class miRNA
Genome position ChrC4:25301402-25301530 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363496
Length 21
Mature sequence(if miRNA) 109 - ACUUAAAUUUAAGUCGUCUGA - 129
Stem-loop(if miRNA) --           -C                     C A       U  CA             A
  AGACGACUUAA  UUAAGUCGUCUGGAAAGUCUU C ACAAAAA AC  CUCAGACGACUUA A
  |||||||||||  ||||||||||||||||||||| | ||||||| ||  |||||||||||||
  UCUGCUGAAUU  AAUUCAGCAGACCUUUCAGAA G UGUUUUU UG  GAGUCUGCUGAAU G
AG           UA                     A C       C  AA             U
Stem-loop sequence AGACGACUUAACUUAAGUCGUCUGGAAAGUCUUCCAACAAAAAUACCACUCAGACGACUUAAAGUUAAGUCGUCUGAGAAGUCUUUUUGUCGAAAGACUUUCCAGACGACUUAAAUUUAAGUCGUCUGA