| ncRNA ID | novel_bna_miR1164 |
| Species | Brassica napus |
| Class | miRNA |
| Genome position | ChrC4:20395991-20396198 [+] |
| Reference genome | Brassica_napus_assembly_v1.0 |
| Source | SRR1363496 |
| Length | 23 |
| Mature sequence(if miRNA) | 186 - UUAAGAUUUGGGUUUAGGAUAUA - 208 |
| Stem-loop(if miRNA) |
--GAC GAAACAACAUUAA UU -------A U A GA GG G UUACG UG GU GA G UCUAAACCCAAAUCUUAAACCCUAAA CA AACCC AAACUU AGG UAUAG UUUG UUCAGG U AUU A UUAG C C |||||||||||||||||||||||||| || ||||| |||||| ||| ||||| |||| |||||| | ||| | |||| | GGAUUUGGGUUUAGAAUUUGGGAUUU GU UUGGG UUUGAG UUU GUAUC AGAU GAGUUU G UAG U AAUU G A AUAUA -----------GG UU AUAUAGAA - A UG UU G -UAUA GU UG AG A |
| Stem-loop sequence | GACUCUAAACCCAAAUCUUAAACCCUAAAGAAACAACAUUAACAUUAACCCAAAACUUUAGGAUAUAGGAUUUGGGUUCAGGGUUUACGAUUUGAGUUUAGGACGCAAGGAUUAAGUUUGGAUAUAUGGUUUGAGUUUAGAGUCUAUGAUUUGAGUUUAAGAUAUAGGGUUUUUGGGUUUAGGGUUUAAGAUUUGGGUUUAGGAUAUA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_013858827.1 |
|
2.5 | PREDICTED: Brassica napus casein kinase I (LOC106418166), mRNA | casein kinase I(LOC106418166) | coding protein | psRNATarget | |||||||||
| XM_013827617.1 |
|
2.5 | PREDICTED: Brassica napus probable arabinosyltransferase ARAD1 (LOC106387705), mRNA | probable arabinosyltransferase ARAD1(LOC106387705) | coding protein | psRNATarget |