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BaseInfo

ncRNA ID novel_bna_miR1159
Species Brassica napus
Class miRNA
Genome position ChrC4:32567279-32567423 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363496
Length 23
Mature sequence(if miRNA) 123 - AUAUGUGUAAAUAAUUGUGGGAU - 145
Stem-loop(if miRNA) --          A          A        UA   C       G   AA              -  UUCUU
  AUAUGUGUAA UAAUUGUGGG UCCACAAU  UUG GGAACCC AUA  UAAGGGUUCUUAAG GA     A
  |||||||||| |||||||||| ||||||||  ||| ||||||| |||  |||||||||||||| ||
  UAUACAUAUU AUUAAUACCC AGGUGUUA  AAC CCUUGGG UAU  AUUCCCAAGAAUUU CU     A
UA          C          C        CA   A       G   CC              U  CCCAA
Stem-loop sequence AUAUGUGUAAAUAAUUGUGGGAUCCACAAUUAUUGCGGAACCCGAUAAAUAAGGGUUCUUAAGGAUUCUUAAAACCCUCUUUUAAGAACCCUUACCUAUGGGGUUCCACAAACAUUGUGGACCCCAUAAUUACUUAUACAUAUAU