ncRNA ID | novel_bna_miR1157 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC4:40929520-40929614 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363496 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUAAAAUUUAGGGUAUAGGAU - 21 |
Stem-loop(if miRNA) |
---------------UAUAU    UG        -A      A    GA    G                     AAUU  GGUUUAGG  UCUAGG UUAG  UUUA G                     ||||  ||||||||  |||||| ||||  |||| A                     UUAG  UUAAGUUU  AGAUUU AGUC  GGAU U UAGGAUAUGGGAUUUAAAAU    GU        AG      G    UG    A |
Stem-loop sequence | UAUAUAAUUUGGGUUUAGGAUCUAGGAUUAGGAUUUAGGAUAUAGGGUCUGAGUUUAGAGAUUUGAAUUUGGAUUUAAAAUUUAGGGUAUAGGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013839014.1 |
|
1.5 | PREDICTED: Brassica napus uncharacterized LOC106398466 (LOC106398466), mRNA | uncharacterized LOC106398466(LOC106398466) | coding protein | psRNATarget |