ncRNA ID | ath-miRf10661-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 22 |
Mature sequence(if miRNA) | NA - UACUCGACCCCCAGGUCGAGUG - NA |
Stem-loop(if miRNA) |
         CCCA             --      ---------------------------CAUUCUUCC    C     ACCACCAGGUCGAGUAACCUCAGCUCA UACUCGACC    GGUCGAGUGACUU  UGGAGC                                    CAUC ACUCG                           G |||||||||    |||||||||||||  ||||||                                    |||| ||||| AUGAGCUGG    CCAGCUCAUUGAA  AUCUCG                                    AUGA GCUGG                           G          UCCC             CC      CUUACCAGCUCACUACCACUACCACACCGCUUCACU    -     UCCCCCAGCUCAUCACAGUAGCUCACC |
Stem-loop sequence | UACUCGACCCCCAGGUCGAGUGACUUUGGAGCCAUUCUUCCCAUCCACUCGACCACCAGGUCGAGUAACCUCAGCUCAGGCCACUCGAUGACACUACUCGACCCCCUGGUCGAGUAUCACUUCGCCACACCAUCACCAUCACUCGACCAUUCGCUCUACCAAGUUACUCGACCCCCUGGUCGAGUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EF183311.1 |
|
2.5 | Arabidopsis thaliana clone asmbl_5275 unknown mRNA sequence | NA | coding protein | psRNATarget |