Search result

BaseInfo

ncRNA ID ath-miRf10661-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - UACUCGACCCCCAGGUCGAGUG - NA
Stem-loop(if miRNA)          CCCA             --      ---------------------------CAUUCUUCC    C     ACCACCAGGUCGAGUAACCUCAGCUCA
UACUCGACC    GGUCGAGUGACUU  UGGAGC                                    CAUC ACUCG                           G
|||||||||    |||||||||||||  ||||||                                    |||| |||||
AUGAGCUGG    CCAGCUCAUUGAA  AUCUCG                                    AUGA GCUGG                           G
         UCCC             CC      CUUACCAGCUCACUACCACUACCACACCGCUUCACU    -     UCCCCCAGCUCAUCACAGUAGCUCACC
Stem-loop sequence UACUCGACCCCCAGGUCGAGUGACUUUGGAGCCAUUCUUCCCAUCCACUCGACCACCAGGUCGAGUAACCUCAGCUCAGGCCACUCGAUGACACUACUCGACCCCCUGGUCGAGUAUCACUUCGCCACACCAUCACCAUCACUCGACCAUUCGCUCUACCAAGUUACUCGACCCCCUGGUCGAGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183311.1
ncRNA:22   GUGAGCUGGACCCCCAGCUCAU   1
  =||||||||*|||||||||||=
targets:436   UACUCGACCAGGGGGUCGAGUG   457

2.5 Arabidopsis thaliana clone asmbl_5275 unknown mRNA sequence NA coding protein psRNATarget