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BaseInfo

ncRNA ID novel_bna_miR1154
Species Brassica napus
Class miRNA
Genome position ChrC6:17031205-17031361 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363495
Length 21
Mature sequence(if miRNA) 137 - ACUUAUAAUUAAGUCGUCUGU - 157
Stem-loop(if miRNA) --                    UAA               A                           A      AUA
  ACUUAUAAUUAAGUCGUCUG   AGUCUUCCAGCUGGA GACUUAGUAGAAGACUUAUAAUUAAGU GUCUGG   G
  ||||||||||||||||||||   ||||||||||||||| ||||||||||||||||||||||||||| ||||||   U
  UGAAUAUUAAUUCAGCAGAC   UCAGAAGGUCGACCU CUGAAUCAUCUUCUGAAUAUUAAUUCA CAGACC   C
UC                    CUG               A                           G      CUU
Stem-loop sequence ACUUAUAAUUAAGUCGUCUGUAAAGUCUUCCAGCUGGAAGACUUAGUAGAAGACUUAUAAUUAAGUAGUCUGGAUAGUCUUCCCAGACGACUUAAUUAUAAGUCUUCUACUAAGUCAUCCAGCUGGAAGACUGUCCAGACGACUUAAUUAUAAGUCU