ncRNA ID | novel_bna_miR1150 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC4:55809724-55809817 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363496 |
Length | 24 |
Mature sequence(if miRNA) | 71 - AGAGUGGAGUUCUUAGCGGAAGUU - 94 |
Stem-loop(if miRNA) |
--                                  ----      ACU   AGAGUGGAGUUCUUAGCGGAAGUUAAGAAACUGU    UUCUUA   U   ||||||||||||||||||||||||||||||||||    ||||||   UCUCACCUCAAGAAUCGCCUUCAGUUCUUUGACA    AAGAAU   C AA                                  CCCC      CGC |
Stem-loop sequence | AGAGUGGAGUUCUUAGCGGAAGUUAAGAAACUGUUUCUUAACUUCCGCUAAGAACCCCACAGUUUCUUGACUUCCGCUAAGAACUCCACUCUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013811713.1 |
|
1.5 | PREDICTED: Brassica napus homeobox protein knotted-1-like 5 (LOC106371604), mRNA | homeobox protein knotted-1-like 5(LOC106371604) | coding protein | psRNATarget |