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BaseInfo

ncRNA ID novel_bna_miR1149
Species Brassica napus
Class miRNA
Genome position ChrC4:56326996-56327185 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363496
Length 24
Mature sequence(if miRNA) 1 - AAACGAAUCGAUCGAUGGAUAUAU - 24
Stem-loop(if miRNA) --                C                      AUAUA        CAUAUUCCUCGGAAUAUACCGAGGGACACCUUUCCUCGGAAUA
  AUAUCCAUCGAUCGAU UGUUUAUAAAAAAACGUUCGGA     CCGAGGAA                                           U
  |||||||||||||||| ||||||||||||||||||||||     ||||||||                                           A
  UAUAGGUAGCUAGCUA GCAAAUAUUUUUUUGCAAGCCU     UAUAUGGC                                           C
UA                A                      -----        UCCCUGUAGAAGGGAGCCAUAUAAGGCUCCUUGUACAGGGAGC
Stem-loop sequence AUAUCCAUCGAUCGAUCUGUUUAUAAAAAAACGUUCGGAAUAUACCGAGGAACAUAUUCCUCGGAAUAUACCGAGGGACACCUUUCCUCGGAAUAUACCGAGGGACAUGUUCCUCGGAAUAUACCGAGGGAAGAUGUCCCUCGGUAUAUUCCGAACGUUUUUUUAUAAACGAAUCGAUCGAUGGAUAUAU