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BaseInfo

ncRNA ID	novel_bna_miR1144
Species	Brassica napus
Class	miRNA
Genome position	ChrC3:16001019-16001141 [+]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR1363496
Length	24
Mature sequence(if miRNA)	100 - GUUUAGUGAUUAAGGUUUAGGGUU - 123
Stem-loop(if miRNA)	--       G       -      AUUUUUGAUUUAAAGUUUAU   UU --  CAAGGGUUCAGGGUUUA   CUCUAGG UUUAAUU UUAAAU                    GAU  A  UC                 U   ||||||| ||||||| ||||||                    |||  |  ||                 C   GGGAUUU GAAUUAG GAUUUG                    CUU  G  CC                 C UU       G       U      -----------------GGA   GG AA  UAUUUGGGACUUGGGAA
Stem-loop sequence	CUCUAGGGUUUAAUUUUAAAUAUUUUUGAUUUAAAGUUUAUGAUUUAUCCAAGGGUUCAGGGUUUAUCCAAGGGUUCAGGGUUUAUCCAAGGGUUCAGGGUUUAGUGAUUAAGGUUUAGGGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013820449.1	ncRNA:24   UUGGGAUUUGGAAUUAGUGAUUUG   1   *|=|*||||||*|||||||||||= targets:933   CAUCAUAAACCCUAAUCACUAAAU   956 Target Full Sequence	2.5	PREDICTED: Brassica napus chaperone protein dnaJ 20, chloroplastic-like (LOC106380646), mRNA	chaperone protein dnaJ 20, chloroplastic-like(LOC106380646)	coding protein	psRNATarget
XM_013870891.1	ncRNA:24   UUGGGAUUUGGAAUUAGUGAUUUG   1   *|=|*||||||*|||||||||||= targets:854   CAUCAUAAACCCUAAUCACUAAAU   877 Target Full Sequence	2.5	PREDICTED: Brassica napus chaperone protein dnaJ 20, chloroplastic-like (LOC106430115), mRNA	chaperone protein dnaJ 20, chloroplastic-like(LOC106430115)	coding protein	psRNATarget