ncRNA ID | novel_bna_miR1143 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC3:13174173-13174309 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363496 |
Length | 23 |
Mature sequence(if miRNA) | 1 - UAGGAUUUAGUGUUUAGGGUUUA - 23 |
Stem-loop(if miRNA) |
UAGGAUUUAGUGU     G      G      G      G      G      G      G      G                   UUAGG UUUAAG UUUAGG UUUAGA UUUAGG UUUAGA UUUAGG UUUAGG UUUAGG              ||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||G              GAUUU GGAUUU AGAUUU GGAUUU GGAUUU GGAUUU GGAUUU GGAUUU AGAUUU ------------G     G      G      G      G      G      G      G      G      |
Stem-loop sequence | UAGGAUUUAGUGUUUAGGGUUUAAGGUUUAGGGUUUAGAGUUUAGGGUUUAGAGUUUAGGGUUUAGGGUUUAGGGUUUAGAGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGAGUUUAGGGUUUAGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013819934.1 |
|
2.5 | PREDICTED: Brassica napus ethylene-responsive transcription factor ERF114-like (LOC106380120), mRNA | ethylene-responsive transcription factor ERF114-like(LOC106380120) | coding protein | psRNATarget |