ncRNA ID | novel_bna_miR1140 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC3:27229531-27229697 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363496 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UGACUUUCAAGUAAGUCGUCUGGG - 24 |
Stem-loop(if miRNA) |
--            GC              A       UU  UU          CA          -A  C U   -      A   CAGACGACUUAC  GGAAGUCGUCCAGU AGACGAC  AC  GAAAGUCGUC  GGAUAAGCAA  UU G CCA GAUUUA U   ||||||||||||  |||||||||||||| |||||||  ||  ||||||||||  ||||||||||  || | ||| |||||| U   GUCUGCUGAAUG  CUUUCAGUAGGUCG UCUGCUG  UG  CUUUCAGCAG  UCUAUUCGUU  AA C GGU UUAGAU C GG            AA              G       UU  UU          UC          CC  A U   A      C |
Stem-loop sequence | CAGACGACUUACGCGGAAGUCGUCCAGUAAGACGACUUACUUGAAAGUCGUCCAGGAUAAGCAAAUUCGUCCAGAUUUAAUUCCUAGAUUAUGGUCAAACCUUGCUUAUCUCUGACGACUUUCUUGUUUGUCGUCUGGCUGGAUGACUUUCAAGUAAGUCGUCUGGG |