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BaseInfo

ncRNA ID novel_bna_miR1140
Species Brassica napus
Class miRNA
Genome position ChrC3:27229531-27229697 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363496
Length 24
Mature sequence(if miRNA) 1 - UGACUUUCAAGUAAGUCGUCUGGG - 24
Stem-loop(if miRNA) --            GC              A       UU  UU          CA          -A  C U   -      A
  CAGACGACUUAC  GGAAGUCGUCCAGU AGACGAC  AC  GAAAGUCGUC  GGAUAAGCAA  UU G CCA GAUUUA U
  ||||||||||||  |||||||||||||| |||||||  ||  ||||||||||  ||||||||||  || | ||| |||||| U
  GUCUGCUGAAUG  CUUUCAGUAGGUCG UCUGCUG  UG  CUUUCAGCAG  UCUAUUCGUU  AA C GGU UUAGAU C
GG            AA              G       UU  UU          UC          CC  A U   A      C
Stem-loop sequence CAGACGACUUACGCGGAAGUCGUCCAGUAAGACGACUUACUUGAAAGUCGUCCAGGAUAAGCAAAUUCGUCCAGAUUUAAUUCCUAGAUUAUGGUCAAACCUUGCUUAUCUCUGACGACUUUCUUGUUUGUCGUCUGGCUGGAUGACUUUCAAGUAAGUCGUCUGGG