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BaseInfo

ncRNA ID novel_bna_miR1139
Species Brassica napus
Class miRNA
Genome position ChrC3:35759908-35760034 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363496
Length 22
Mature sequence(if miRNA) 106 - AGCUCAACCAUCACGUCGGUCA - 127
Stem-loop(if miRNA) --  CU      U    U    -           C  A    A   A    -U    AUA     
  AG  CAACCA CACG CGGU CAGCUCGUCGG GA CUGA CCG CGUG  GGUU   CUCGCC
  ||  |||||| |||| |||| ||||||||||| || |||| ||| ||||  ||||   |||||C
  UC  GUUGGU GUGC GCUA GUCGAGCGGCC CU GACU GGC GCAC  CCAA   GAGCGG
GC  AC      -    U    A           A  C    -   C    UU    CUC     
Stem-loop sequence AGCUCAACCAUCACGUCGGUCAGCUCGUCGGCGAACUGAACCGACGUGUGGUUAUACUCGCCCGGCGAGCUCAACCUUCACGCCGGUCAGCUCACCGGCGAGCUGAAUCGUCGUGUGGUUGCACUCG