ncRNA ID | novel_bna_miR1139 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC3:35759908-35760034 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363496 |
Length | 22 |
Mature sequence(if miRNA) | 106 - AGCUCAACCAUCACGUCGGUCA - 127 |
Stem-loop(if miRNA) |
--  CU      U    U    -           C  A    A   A    -U    AUA        AG  CAACCA CACG CGGU CAGCUCGUCGG GA CUGA CCG CGUG  GGUU   CUCGCC   ||  |||||| |||| |||| ||||||||||| || |||| ||| ||||  ||||   |||||C   UC  GUUGGU GUGC GCUA GUCGAGCGGCC CU GACU GGC GCAC  CCAA   GAGCGG GC  AC      -    U    A           A  C    -   C    UU    CUC      |
Stem-loop sequence | AGCUCAACCAUCACGUCGGUCAGCUCGUCGGCGAACUGAACCGACGUGUGGUUAUACUCGCCCGGCGAGCUCAACCUUCACGCCGGUCAGCUCACCGGCGAGCUGAAUCGUCGUGUGGUUGCACUCG |