ncRNA ID | ath-miRf10659-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 25 |
Mature sequence(if miRNA) | NA - UGGUGAUGUCUUCUACUCGACCUGG - NA |
Stem-loop(if miRNA) |
      -AA     G   U -UU          UG            UCU   G   GAGGUG   UUGGU AUG C   CUACUCGACC  GGGGUCGAGUGG   CUU AGA ||||||   ||||| ||| |   ||||||||||  ||||||||||||   ||| ||U CUUCGC   GACUA UAC G   GGUGAGCUGG  CUCCAGCUCAUC   GAA UUC       CUG     G   U UUU          GU            CUC   G   |
Stem-loop sequence | GAGGUGAAUUGGUGAUGUCUUCUACUCGACCUGGGGGUCGAGUGGUCUCUUGAGAUCUUGAAGCUCCUACUCGACCUCUGGGUCGAGUGGUUUGUCAUGAUCAGGUCCGCUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EF183194.1 |
|
0.0 | Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence | NA | coding protein | psRNATarget | |||||||||
NM_103391.1 |
|
1.5 | Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA | DNAse I-like superfamily protein(AT1G40390) | coding protein | psRNATarget |