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BaseInfo

ncRNA ID ath-miRf10659-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 25
Mature sequence(if miRNA) NA - UGGUGAUGUCUUCUACUCGACCUGG - NA
Stem-loop(if miRNA)       -AA     G   U -UU          UG            UCU   G  
GAGGUG   UUGGU AUG C   CUACUCGACC  GGGGUCGAGUGG   CUU AGA
||||||   ||||| ||| |   ||||||||||  ||||||||||||   ||| ||U
CUUCGC   GACUA UAC G   GGUGAGCUGG  CUCCAGCUCAUC   GAA UUC
      CUG     G   U UUU          GU            CUC   G  
Stem-loop sequence GAGGUGAAUUGGUGAUGUCUUCUACUCGACCUGGGGGUCGAGUGGUCUCUUGAGAUCUUGAAGCUCCUACUCGACCUCUGGGUCGAGUGGUUUGUCAUGAUCAGGUCCGCUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183194.1
ncRNA:25   GGUCCAGCUCAUCUUCUGUAGUGGU   1
  |||||||||||||||||||||||||
targets:460   CCAGGUCGAGUAGAAGACAUCACCA   484

0.0 Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence NA coding protein psRNATarget
NM_103391.1
ncRNA:25   GGUCCAGCUCAUCUUCUGUAGUGGU   1
  |||||||||||||||||*|||||||
targets:1115   CCAGGUCGAGUAGAAGAAAUCACCA   1139

1.5 Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA DNAse I-like superfamily protein(AT1G40390) coding protein psRNATarget