ncRNA ID | novel_bna_miR1127 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC1:25977381-25977599 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363496 |
Length | 24 |
Mature sequence(if miRNA) | 196 - AAGGAUUAUGAUUUAGGGUUUAGU - 219 |
Stem-loop(if miRNA) |
--                    C        UG --G     C                      A       UAA               -    -    UAAACCCUAA   UAAACUCUAAAUCAUAAUCC UAAACUCU  G   UAAAC CUAAACCUUUGGAUAAAUCAUA ACUCUAA   AAAAACACUAAACAC GAAA ACUC          A   |||||||||||||||||||| ||||||||  |   ||||| |||||||||||||||||||||| |||||||   ||||||||||||||| |||| ||||          C   AUUUGGGAUUUAGUAUUAGG AUUUGGGA  U   AUUUG GAUUUGGGAACCUAUUUAGUAU UGAGAUU   UUUUUGUGAUUUGUG UUUU UGAG          C UG                    A        UU AGG     A                      G       UAG               A    A    UUUCCAAAUG |
Stem-loop sequence | UAAACUCUAAAUCAUAAUCCCUAAACUCUUGGGUAAACCCUAAACCUUUGGAUAAAUCAUAAACUCUAAUAAAAAAACACUAAACACGAAAACUCUAAACCCUAAACCGUAAACCUUUGAGUAUUUUAGUGUUUAGUGUUUUUGAUUUAGAGUGUAUGAUUUAUCCAAGGGUUUAGAGUUUAGGAUUUAGGGUUUAAGGAUUAUGAUUUAGGGUUUAGU |