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BaseInfo

ncRNA ID novel_bna_miR1126
Species Brassica napus
Class miRNA
Genome position ChrC1:15130716-15130827 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363496
Length 23
Mature sequence(if miRNA) 90 - UAGGAUUUAGUGUUUAGGGUUUA - 112
Stem-loop(if miRNA) --           -    C                 C      --        AAACA
  AACCCUAAACG UAAA CCUAAACUCUAAAUCUU AAAUCU  AAACCCUA     U
  ||||||||||| |||| ||||||||||||||||| ||||||  ||||||||
  UUGGGAUUUGU AUUU GGAUUUGGGAUUUGGGA UUUGGA  UUUGGGAU     C
AU           G    A                 -      AU        CUCAA
Stem-loop sequence AACCCUAAACGUAAACCCUAAACUCUAAAUCUUCAAAUCUAAACCCUAAAACAUCAACUCUAGGGUUUUAAGGUUUAGGGUUUAGGGUUUAGGAUUUAGUGUUUAGGGUUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013819934.1
ncRNA:23   AUUUGGGAUUUGUGAUUUAGGAU   1
  **||||||||||*|||||||||*
targets:67   ACAACCCUAAACUCUAAAUCCUC   89

2.5 PREDICTED: Brassica napus ethylene-responsive transcription factor ERF114-like (LOC106380120), mRNA ethylene-responsive transcription factor ERF114-like(LOC106380120) coding protein psRNATarget