ncRNA ID | novel_bna_miR1126 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC1:15130716-15130827 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363496 |
Length | 23 |
Mature sequence(if miRNA) | 90 - UAGGAUUUAGUGUUUAGGGUUUA - 112 |
Stem-loop(if miRNA) |
--           -    C                 C      --        AAACA   AACCCUAAACG UAAA CCUAAACUCUAAAUCUU AAAUCU  AAACCCUA     U   ||||||||||| |||| ||||||||||||||||| ||||||  ||||||||   UUGGGAUUUGU AUUU GGAUUUGGGAUUUGGGA UUUGGA  UUUGGGAU     C AU           G    A                 -      AU        CUCAA |
Stem-loop sequence | AACCCUAAACGUAAACCCUAAACUCUAAAUCUUCAAAUCUAAACCCUAAAACAUCAACUCUAGGGUUUUAAGGUUUAGGGUUUAGGGUUUAGGAUUUAGUGUUUAGGGUUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013819934.1 |
|
2.5 | PREDICTED: Brassica napus ethylene-responsive transcription factor ERF114-like (LOC106380120), mRNA | ethylene-responsive transcription factor ERF114-like(LOC106380120) | coding protein | psRNATarget |