| ncRNA ID | novel_bna_miR1121 |
| Species | Brassica napus |
| Class | miRNA |
| Genome position | ChrA9:45056003-45056128 [-] |
| Reference genome | Brassica_napus_assembly_v1.0 |
| Source | SRR1363496 |
| Length | 21 |
| Mature sequence(if miRNA) | 1 - AGAGAUCCGCAUUAAUCAUGC - 21 |
| Stem-loop(if miRNA) |
-- AG G UAAUAAUAAGAUAU C AC AA AUGAUUAAUGCG UCUCUUAGGGUGGG UUCUUAGCU GU UCUUA UUUU C |||||||||||| |||||||||||||| ||||||||| || ||||| |||| U UACUAAUUACGC AGAGAAUCUCACCC AAGAAUCGG CA AGAAU AAAA A CG CU - -------------- A CA AA |
| Stem-loop sequence | AUGAUUAAUGCGAGUCUCUUAGGGUGGGGUUCUUAGCUUAAUAAUAAGAUAUGUCUCUUAACUUUUAACUAAAAAAAACUAAGAAACGGCUAAGAACCCACUCUAAGAGAUCCGCAUUAAUCAUGC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_013852730.1 |
|
1.5 | PREDICTED: Brassica napus adenine phosphoribosyltransferase 2 (LOC106411879), transcript variant X2, mRNA | adenine phosphoribosyltransferase 2(LOC106411879) | coding protein | psRNATarget | |||||||||
| XM_013879859.1 |
|
1.5 | PREDICTED: Brassica napus protein CURVATURE THYLAKOID 1A, chloroplastic-like (LOC106438622), mRNA | protein CURVATURE THYLAKOID 1A, chloroplastic-like(LOC106438622) | coding protein | psRNATarget |