| ncRNA ID | novel_bna_miR1119 |
| Species | Brassica napus |
| Class | miRNA |
| Genome position | ChrA9:31873224-31873378 [+] |
| Reference genome | Brassica_napus_assembly_v1.0 |
| Source | SRR1363496 |
| Length | 24 |
| Mature sequence(if miRNA) | 132 - AAUGAUAUUUUUUGCAGUCGGCUA - 155 |
| Stem-loop(if miRNA) |
-- UAAUAUUUAGUGGUUU A GGUAAU AAGA GCCGACUGCAAAAAAUAUCAUUAUUGUAAAACUCUCUACAAA GGUA CGUUAUUG AUC A |||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||| CGGCUGACGUUUUUUAUAGUAAUAACAUUUUGAGAGAUGUUU UCAU GUAAUAAC UGG U AU ---------------U A --AUUU GAUU |
| Stem-loop sequence | GCCGACUGCAAAAAAUAUCAUUAUUGUAAAACUCUCUACAAAUAAUAUUUAGUGGUUUGGUAACGUUAUUGGGUAAUAUCAAGAAUUUAGGGUUUUACAAUAAUGAUACUUUUUGUAGAGAGUUUUACAAUAAUGAUAUUUUUUGCAGUCGGCUA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_013801664.1 |
|
2.0 | PREDICTED: Brassica napus protein NRT1/ PTR FAMILY 5.15-like (LOC106361859), transcript variant X1, mRNA | protein NRT1/ PTR FAMILY 5.15-like(LOC106361859) | coding protein | psRNATarget | |||||||||
| XM_013801665.1 |
|
2.0 | PREDICTED: Brassica napus protein NRT1/ PTR FAMILY 5.15-like (LOC106361859), transcript variant X2, mRNA | protein NRT1/ PTR FAMILY 5.15-like(LOC106361859) | coding protein | psRNATarget |