| ncRNA ID | novel_bna_miR1117 |
| Species | Brassica napus |
| Class | miRNA |
| Genome position | ChrA9:4918974-4919099 [-] |
| Reference genome | Brassica_napus_assembly_v1.0 |
| Source | SRR1363496 |
| Length | 24 |
| Mature sequence(if miRNA) | 103 - AAUGGAGUAAAAGUGGAUAUGGAG - 126 |
| Stem-loop(if miRNA) |
-- A CU C A C AUA A AAUGGAGUAAAAGUGGAUAUGGAGUAAAAA UGUU GA UC ACU CAU UCACUCC U |||||||||||||||||||||||||||||| |||| || || ||| ||| ||||||| A UUACCUCAUUUUCACCUAUACUUCAUUUUU ACGA UU AG UGA GUA AGUGAGG A UU - AG A G A AAG U |
| Stem-loop sequence | AAUGGAGUAAAAGUGGAUAUGGAGUAAAAAAUGUUCUGACUCAACUCCAUAUAUCACUCCAUAAUGGAGUGAGAAAUGAAGUGGAAUUGAAGCAUUUUUACUUCAUAUCCACUUUUACUCCAUUUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_013789828.1 |
|
2.0 | PREDICTED: Brassica napus transmembrane and coiled-coil domain-containing protein 4-like (LOC106349836), transcript variant X1, mRNA | transmembrane and coiled-coil domain-containing protein 4-like(LOC106349836) | coding protein | psRNATarget | |||||||||
| FJ384103.1 |
|
2.5 | Brassica napus cultivar Westar WRKY transcription factor 18 (WRKY18) mRNA, WRKY18-2 allele, complete cds | NA | coding protein | psRNATarget |