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BaseInfo

ncRNA ID novel_bna_miR1116
Species Brassica napus
Class miRNA
Genome position ChrA2:9312647-9312837 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363495
Length 24
Mature sequence(if miRNA) 168 - ACGGGUAUUCGAACAAGCAUGUAA - 191
Stem-loop(if miRNA) --           G     A           A                 A            CC        ---C   AUAUAUAUAAAAUCAGUAU
  ACAUGUUUGUU GAAUA CCCGUAAAACU UACUCAUAAAAAUAUCA UAAUAACAUGUU  AUCGUAUC    AUA                   U
  ||||||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||||  ||||||||    |||
  UGUACGAACAA CUUAU GGGCAUUUUGA AUGAGUAUUUUUAUAGU AUUAUUGUACAG  UAGUAUAG    UUA                   A
AA           G     -           A                 G            -A        UAAU   UAAUAAUCAUCGAUUGAUA
Stem-loop sequence ACAUGUUUGUUGGAAUAACCCGUAAAACUAUACUCAUAAAAAUAUCAAUAAUAACAUGUUCCAUCGUAUCCAUAAUAUAUAUAAAAUCAGUAUUAAUAGUUAGCUACUAAUAAUAUUUAAUGAUAUGAUAGACAUGUUAUUAGUGAUAUUUUUAUGAGUAAAGUUUUACGGGUAUUCGAACAAGCAUGUAA