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BaseInfo

ncRNA ID	novel_bna_miR1115
Species	Brassica napus
Class	miRNA
Genome position	ChrA9:13223387-13223435 [-]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR1363496
Length	24
Mature sequence(if miRNA)	1 - AAAAAAUGGAGUAGAGAUGGAGAU - 24
Stem-loop(if miRNA)	--A                   AG    UUCAUUUUUACUUUAUUUU  A    |||||||||||||||||||  A    AGGUAGAGAUGAGGUAAAA  U UAG                   AA
Stem-loop sequence	AUUCAUUUUUACUUUAUUUUAGAAUAAAAAAUGGAGUAGAGAUGGAGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013789828.1	ncRNA:24   UAGAGGUAGAGAUGAGGUAAAAAA   1   |||||||||*|||||||||||||| targets:2191   AUCUCCAUCCCUACUCCAUUUUUU   2214 Target Full Sequence	1.0	PREDICTED: Brassica napus transmembrane and coiled-coil domain-containing protein 4-like (LOC106349836), transcript variant X1, mRNA	transmembrane and coiled-coil domain-containing protein 4-like(LOC106349836)	coding protein	psRNATarget
XM_013808607.1	ncRNA:24   UAG-----AGGUAGAGAUGAGGUAAAAAA   1   |||-----|||||||=||=|||||||||| targets:6   AUCCUUUAUCCAUCUUUAUUCCAUUUUUU   34 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106368607 (LOC106368607), mRNA	uncharacterized LOC106368607(LOC106368607)	coding protein	psRNATarget
XM_013805282.1	ncRNA:23   AGAGGUAGAGAUGAGGUAAAAAA   1   |*|||||||=||=|||||||||| targets:1   UAUCCAUCUUUAUUCCAUUUUUU   23 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106365791 (LOC106365791), mRNA	uncharacterized LOC106365791(LOC106365791)	coding protein	psRNATarget