| ncRNA ID | novel_bna_miR1114 |
| Species | Brassica napus |
| Class | miRNA |
| Genome position | ChrA1:1551946-1552114 [+] |
| Reference genome | Brassica_napus_assembly_v1.0 |
| Source | SRR1363496 |
| Length | 24 |
| Mature sequence(if miRNA) | 146 - AGGUUCACCAACCAAUAUGAUUGU - 169 |
| Stem-loop(if miRNA) |
-- C A A C UUC --U UG UAUA A AAUC UAUUGGUUGGUGAACCUAGAGGUUCACCCUAGGG GUG ACC AAGAAUAAGUC AAGUU U GUG CAC G |||| |||||||||||||||||||||||||||||||||| ||| ||| ||||||||||| ||||| | ||| ||| UUAG AUAACCAACCACUUGGAUCUCCAAGUGGGAUUCC CAC UGG UUCUUAUUCAG UUUAA A UAU GUG G UG U C C A UAU UAC GU -UGG G |
| Stem-loop sequence | AAUCCUAUUGGUUGGUGAACCUAGAGGUUCACCCUAGGGAGUGAACCCAAGAAUAAGUCUUCAAGUUUUUGGUGUAUACACAGGGGUGGGUUAUUGACAUAAUUUUAUGACUUAUUCUUAGGUCCACCCCUUAGGGUGAACCUCUAGGUUCACCAACCAAUAUGAUUGU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_013795463.1 |
|
2.5 | PREDICTED: Brassica napus aquaporin TIP3-1-like (LOC106355537), partial mRNA | aquaporin TIP3-1-like(LOC106355537) | coding protein | psRNATarget | |||||||||
| XM_013890129.1 |
|
2.5 | PREDICTED: Brassica napus aquaporin TIP3-1-like (LOC106448209), mRNA | aquaporin TIP3-1-like(LOC106448209) | coding protein | psRNATarget |