ncRNA ID | novel_bna_miR1109 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA8:10148128-10148246 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363496 |
Length | 24 |
Mature sequence(if miRNA) | 96 - AGGGGAAAAUAUAGAGAUUUGCUA - 119 |
Stem-loop(if miRNA) |
--UUUU                   -        A                 GGAUU   UC       AUCUCUAUAUUUUCCUCUA AAAUAGAG AACUCUAUUAUAGAGGU     UGC  C       ||||||||||||||||||| |||||||| |||||||||||||||||     |||       UAGAGAUAUAAAAGGGGAU UUUAUCUC UUGAGAUAAUAUCUCCG     AUG  A AUCGUU                   A        C                 ----U   UA |
Stem-loop sequence | UUUUAUCUCUAUAUUUUCCUCUAAAAUAGAGAAACUCUAUUAUAGAGGUGGAUUUGCUCCAAUGUAUGCCUCUAUAAUAGAGUUCCUCUAUUUAUAGGGGAAAAUAUAGAGAUUUGCUA |