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BaseInfo

ncRNA ID	novel_bna_miR1105
Species	Brassica napus
Class	miRNA
Genome position	ChrA1:10918191-10918247 [+]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR1363496
Length	24
Mature sequence(if miRNA)	34 - CUACGUGGACUGUCCGUGGGUGAU - 57
Stem-loop(if miRNA)	--       GA    U    --       A   CGCCCAC  GGAC GUCC  GUGGGUG U   |||||||  |||| ||||  ||||||| U   GUGGGUG  CCUG CAGG  CAUCCGC U UA       --    U    UG       U
Stem-loop sequence	CGCCCACGAGGACUGUCCGUGGGUGAUUUUCGCCUACGUGGACUGUCCGUGGGUGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013894615.1	ncRNA:24   UAGUGGGUGCCUGUCAGGUGCAUC   1   ||=-|||||*||||||*||||||| targets:497   AUU-CCCACCGACAGUACACGUAG   519 Target Full Sequence	2.5	PREDICTED: Brassica napus 40S ribosomal protein S14-2 (LOC106452480), mRNA	40S ribosomal protein S14-2(LOC106452480)	coding protein	psRNATarget
XM_013792726.1	ncRNA:24   UAGUGGGUGCCUGUCAGGUGCAUC   1   ||=-|||||*||||||*||||||| targets:480   AUU-CCCACCGACAGUACACGUAG   502 Target Full Sequence	2.5	PREDICTED: Brassica napus 40S ribosomal protein S14-2 (LOC106353053), mRNA	40S ribosomal protein S14-2(LOC106353053)	coding protein	psRNATarget
XM_013789299.1	ncRNA:24   UAGUGGGUGCCUGUCAGGUGCAUC   1   ||=-|||||*||||||*||||||| targets:470   AUU-CCCACCGACAGUACACGUAG   492 Target Full Sequence	2.5	PREDICTED: Brassica napus 40S ribosomal protein S14-2 (LOC106349349), mRNA	40S ribosomal protein S14-2(LOC106349349)	coding protein	psRNATarget
XM_013863602.1	ncRNA:24   UAGUGGGUGCCUGUCAGGUGCAUC   1   =|=-|||||*||||||*||||||| targets:480   GUU-CCCACAGACAGUACACGUAG   502 Target Full Sequence	2.5	PREDICTED: Brassica napus 40S ribosomal protein S14-2-like (LOC106422805), mRNA	40S ribosomal protein S14-2-like(LOC106422805)	coding protein	psRNATarget
XM_013878027.1	ncRNA:24   UAGUGGGUGCCUGUCAGGUGCAUC   1   =|=-|||||*||||||*||||||| targets:491   GUU-CCCACCGACAGUACACGUAG   513 Target Full Sequence	2.5	PREDICTED: Brassica napus 40S ribosomal protein S14-2-like (LOC106437093), mRNA	40S ribosomal protein S14-2-like(LOC106437093)	coding protein	psRNATarget