ncRNA ID | novel_bna_miR1104 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC8:35869919-35869996 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363495 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GAGGAUUUCAUUUUCUGUCGGAAU - 24 |
Stem-loop(if miRNA) |
--         UU    -UU             G    UA   UCCGACGGA  GAUG   UCCUCGGAAUUUC UCGG  U   |||||||||  ||||   ||||||||||||| ||||   AGGCUGUCU  UUAC   AGGAGCCUUAAAG AGCC  A UA         -U    UUU             G    UU |
Stem-loop sequence | UCCGACGGAUUGAUGUUUCCUCGGAAUUUCGUCGGUAUAUUCCGAGGAAAUUCCGAGGAUUUCAUUUUCUGUCGGAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013795208.1 |
|
2.5 | PREDICTED: Brassica napus PYK10-binding protein 1-like (LOC106355223), mRNA | PYK10-binding protein 1-like(LOC106355223) | coding protein | psRNATarget |