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BaseInfo

ncRNA ID novel_bna_miR1102
Species Brassica napus
Class miRNA
Genome position ChrA7:34253379-34253427 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363496
Length 23
Mature sequence(if miRNA) 1 - UUGAAGCGAUUUGUAGCGGUUUA - 23
Stem-loop(if miRNA) -    -    A    U       U
 UUGA AGCG UUUG AGCGGUU A
 |||| |||| |||| ||||||| U
 AACU UCGC AAGC UUGUUAG A
C    G    A    U       U
Stem-loop sequence UUGAAGCGAUUUGUAGCGGUUUAUAUGAUUGUUUCGAAACGCUGUCAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013799003.1
ncRNA:23   AUUUGGCGAUGUUUAGCGAAGUU   1
  *|||||*|**|||||||||||||
targets:725   GAAACCCCACCAAAUCGCUUCAA   747

3.0 PREDICTED: Brassica napus uncharacterized LOC106359279 (LOC106359279), mRNA uncharacterized LOC106359279(LOC106359279) coding protein psRNATarget