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BaseInfo

ncRNA ID novel_bna_miR1101
Species Brassica napus
Class miRNA
Genome position ChrA7:2908668-2908834 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363496
Length 24
Mature sequence(if miRNA) 144 - UGACUUUCAAGUAAGUCGUCUGGG - 167
Stem-loop(if miRNA) --             C        -   A   A      U   UUG          AG         -AAUC U     -    U
  CAGACGACUUACU GGAAGUCG CCA GUA GACGAC UAC   AAAGUCGUCC  GAUAAGCAA     G CCAGA UUUA U
  ||||||||||||| |||||||| ||| ||| |||||| |||   ||||||||||  |||||||||     | ||||| |||| U
  GUCUGCUGAAUGA CUUUCAGU GGU CAU CUGCUG AUG   UUUCAGCAGG  CUAUUCGUU     C GGUCU AGAU C
GG             A        A   C   -      C   CUA          CU         CCAAA U     U    C
Stem-loop sequence CAGACGACUUACUCGGAAGUCGCCAAGUAAGACGACUUACUUGAAAGUCGUCCAGGAUAAGCAAAAUCGUCCAGAUUUAUUUCCUAGAUUCUGGUCAAACCUUGCUUAUCUCGGACGACUUUAUCGUACGUCGUCUACCUGGAUGACUUUCAAGUAAGUCGUCUGGG