ncRNA ID | novel_bna_miR1100 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA7:27810295-27810462 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363496 |
Length | 23 |
Mature sequence(if miRNA) | 146 - UAUGAUUUAGAGUUUAGGAUUUA - 168 |
Stem-loop(if miRNA) |
--AAC      U      ---      U      CCUUG      C       UAUAG G            -  UAGGAU        AAG      CUUAAA CUUUGG   GUAAAC CUAAAC     GGUAAA CCUAAAC     G UAAAUCCUAAAC CC      UUAGGGCU   A      |||||| ||||||   |||||| ||||||     |||||| |||||||     | |||||||||||| ||      ||||||||   U      GGAUUU GAGAUU   UAUUUG GAUUUG     UUAUUU GGAUUUG     U AUUUAGGAUUUG GG      AAUUUUGA   U AUUUA      -      UAG      U      -----      A       ----- G            C  --CAGU        GAU |
Stem-loop sequence | AACCUUAAAUCUUUGGGUAAACUCUAAACCCUUGGGUAAACCCUAAACUAUAGGGUAAAUCCUAAACCCUAGGAUUUAGGGCUAAGAUUUAGAGUUUUAAUGACGGCGUUUAGGAUUUAGUGUUUAGGAUUUAUUGUUUAGUGUUUAUGAUUUAGAGUUUAGGAUUUA |