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BaseInfo

ncRNA ID novel_bna_miR1100
Species Brassica napus
Class miRNA
Genome position ChrA7:27810295-27810462 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363496
Length 23
Mature sequence(if miRNA) 146 - UAUGAUUUAGAGUUUAGGAUUUA - 168
Stem-loop(if miRNA) --AAC      U      ---      U      CCUUG      C       UAUAG G            -  UAGGAU        AAG
     CUUAAA CUUUGG   GUAAAC CUAAAC     GGUAAA CCUAAAC     G UAAAUCCUAAAC CC      UUAGGGCU   A
     |||||| ||||||   |||||| ||||||     |||||| |||||||     | |||||||||||| ||      ||||||||   U
     GGAUUU GAGAUU   UAUUUG GAUUUG     UUAUUU GGAUUUG     U AUUUAGGAUUUG GG      AAUUUUGA   U
AUUUA      -      UAG      U      -----      A       ----- G            C  --CAGU        GAU
Stem-loop sequence AACCUUAAAUCUUUGGGUAAACUCUAAACCCUUGGGUAAACCCUAAACUAUAGGGUAAAUCCUAAACCCUAGGAUUUAGGGCUAAGAUUUAGAGUUUUAAUGACGGCGUUUAGGAUUUAGUGUUUAGGAUUUAUUGUUUAGUGUUUAUGAUUUAGAGUUUAGGAUUUA