ncRNA ID | novel_bna_miR1098 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA1:526487-526606 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363496 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUAAAAUUUAGGGUAUAGGAU - 21 |
Stem-loop(if miRNA) |
--      G G       A GG AUAU            U G      A     G        CUUGUA U UGGGUUU G  U    AAUUUGGGUUUA G UCUAGG UUAGG UUUAUG   |||||| | ||||||| |  |    |||||||||||| | |||||| ||||| |||||G   GGAUAU G AUUUAAA U  G    UUGGAUUUAGGU U GGAUUU AGUUU GGAUAU UA      G G       A UU -GAU            U G      G     G      |
Stem-loop sequence | CUUGUAGUGUGGGUUUAGGGUAUAUAAUUUGGGUUUAUGGUCUAGGAUUAGGGUUUAUGGUAUAGGGUUUGAGUUUAGGGUUUGGAUUUAGGUUUAGGUUUAAAAUUUAGGGUAUAGGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013839014.1 |
|
1.5 | PREDICTED: Brassica napus uncharacterized LOC106398466 (LOC106398466), mRNA | uncharacterized LOC106398466(LOC106398466) | coding protein | psRNATarget |