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BaseInfo

ncRNA ID	novel_bna_miR1094
Species	Brassica napus
Class	miRNA
Genome position	ChrC8:33890359-33890506 [+]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR1363495
Length	21
Mature sequence(if miRNA)	128 - UUAUAGAGUCAUACAUUGGAG - 148
Stem-loop(if miRNA)	--   U      U  A              U   UUUAU        ---     GAAAAUACUAUUUUCAUCCUC   CCA UGUAUG CU UAUAAUAGAGUUUU CUA     AGGAGAAA   AUAUA                     A   ||| |||||| || |||||||||||||| |||     ||||||||   |||||   GGU ACAUAC GA AUAUUAUCUCAAGA GAU     UUUACAUU   UUGUU                     A GA   U      U  G              -   CACCU        UUU     UCAUGAUAAAACGGCGAUGUA
Stem-loop sequence	CCAUUGUAUGUCUAUAUAAUAGAGUUUUUCUAUUUAUAGGAGAAAAUAUAGAAAAUACUAUUUUCAUCCUCAAAUGUAGCGGCAAAAUAGUACUUUGUUUUUUUACAUUUUCCACUAGAGAACUCUAUUAUAGAGUCAUACAUUGGAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013786550.1	ncRNA:21   GAGGUUACAUACUGAGAUAUU   1   **||||||*|||||||||||= targets:2010   AACCAAUGGAUGACUCUAUAG   2030 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106347058 (LOC106347058), transcript variant X1, mRNA	uncharacterized LOC106347058(LOC106347058)	coding protein	psRNATarget
XM_013786551.1	ncRNA:21   GAGGUUACAUACUGAGAUAUU   1   **||||||*|||||||||||= targets:2010   AACCAAUGGAUGACUCUAUAG   2030 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106347058 (LOC106347058), transcript variant X2, mRNA	uncharacterized LOC106347058(LOC106347058)	coding protein	psRNATarget
XM_013891622.1	ncRNA:21   GAGGUUACAUACUGAGAUAUU   1   **||||||*|||||||||||= targets:1953   AACCAAUGGAUGACUCUAUAG   1973 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106449960 (LOC106449960), mRNA	uncharacterized LOC106449960(LOC106449960)	coding protein	psRNATarget