ncRNA ID | novel_bna_miR1090 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA7:7967674-7967862 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363496 |
Length | 24 |
Mature sequence(if miRNA) | 166 - AGGGUUUAGUGUUUUGCUGACGGC - 189 |
Stem-loop(if miRNA) |
-  - UG AU    C            U           AAAUC   AACACUAGACCCUAAACCCUAAACUUUUGAAUAAAUCAUAACCCUAAAU  CC U  G  AAAC CUAAACCCUAAA CACUUAACCUU     CUA                                                 C  || |  |  |||| |||||||||||| |||||||||||     |||                                                 A  GG A  C  UUUG GAUUUGGGAUUU GUGAAUUGGAA     UGG                                                 U C  C GU GU    U            -           ---AU   AAUUUGAGAUUUGGAAACCUAUUUAGUAUUUAGGAUCACAAAUCACAUA |
Stem-loop sequence | CCUUGGAUAAACCCUAAACCCUAAAUCACUUAACCUUAAAUCCUAAACACUAGACCCUAAACCCUAAACUUUUGAAUAAAUCAUAACCCUAAAUCAUAUACACUAAACACUAGGAUUUAUGAUUUAUCCAAAGGUUUAGAGUUUAAGGUUAAAGGUUAAGUGUUUAGGGUUUAGUGUUUUGCUGACGGC |