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BaseInfo

ncRNA ID novel_bna_miR1088
Species Brassica napus
Class miRNA
Genome position ChrA6:24839007-24839168 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363496
Length 24
Mature sequence(if miRNA) 1 - AUUAUAGAGGCAUACAUUGGAACA - 24
Stem-loop(if miRNA) --           U A      ------         C       -   A        C     AAA       U UG C    U
  UUCCAAUGUAU C UCUAUA      AUAGAGUUU UCUAUUU UAG GGAAAAUA AGAGA   GUUAUUU U  C UCUA A
  ||||||||||| | ||||||      ||||||||| ||||||| ||| |||||||| |||||   ||||||| |  | ||||
  AAGGUUACAUA G AGAUAU      UAUCUCAAG AGAUAAA AUC CUUUUUAU UCUCU   CAAUAAA A  G AGAU U
AC           C G      UAUAAA         U       U   C        A     AUA       - GU C    U
Stem-loop sequence UUCCAAUGUAUUCAUCUAUAAUAGAGUUUCUCUAUUUUAGAGGAAAAUACAGAGAAAAGUUAUUUUUUGCCUCUAUAUUUAGACGUGAAAAUAACAUAUCUCUAUAUUUUUCCCUAUAAAUAGAUGAACUCUAUAAAUAUUAUAGAGGCAUACAUUGGAACA