ncRNA ID | novel_bna_miR1086 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA6:41286057-41286109 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363496 |
Length | 24 |
Mature sequence(if miRNA) | 30 - AUAUGUGUAUGUAGUUGUGGGAUC - 53 |
Stem-loop(if miRNA) |
------UUGUA                U            UAUAUAUAUAUAUAUA A            |||||||||||||||| U            AUGUAUGUGUAUAUAU A CUAGGGUGUUG                U |
Stem-loop sequence | UUGUAUAUAUAUAUAUAUAUAUAUAUUAUAUAUGUGUAUGUAGUUGUGGGAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013814564.1 |
|
3.0 | PREDICTED: Brassica napus putative glycine-rich cell wall structural protein 1 (LOC106374568), mRNA | putative glycine-rich cell wall structural protein 1(LOC106374568) | coding protein | psRNATarget | |||||||||
XM_013798792.1 |
|
3.0 | PREDICTED: Brassica napus keratin, type II cytoskeletal 1-like (LOC106359027), mRNA | keratin, type II cytoskeletal 1-like(LOC106359027) | coding protein | psRNATarget |