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BaseInfo

ncRNA ID novel_bna_miR1084
Species Brassica napus
Class miRNA
Genome position ChrA6:30065796-30065904 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363496
Length 24
Mature sequence(if miRNA) 1 - GUUUUGCUCGGUUCUGUGGGCGGU - 24
Stem-loop(if miRNA) --   U   U   UU  G -      -U      -   -   UUUC         G U
  GUU UGC CGG  CU U GGGCGG  GCUCCG GUU CGG    UCUAGAUUU C C
  ||| ||| |||  || | ||||||  |||||| ||| |||    ||||||||| | C
  CGA ACG GCU  GA G CUUGUC  CGGGGU CGG GCC    AGAUUUGAA G G
GG   C   -   UU  G U      UU      U   U   ---U         G G
Stem-loop sequence GUUUUGCUCGGUUCUGUGGGCGGUGCUCCGGUUCGGUUUCUCUAGAUUUGCUCCGGGGAAGUUUAGAUCCGUGGCUUGGGGCUUCUGUUCUGGAGUUUCGGCACAGCGG