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BaseInfo

ncRNA ID novel_bna_miR1081
Species Brassica napus
Class miRNA
Genome position ChrA6:14363773-14363822 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363496
Length 24
Mature sequence(if miRNA) 27 - AAGAAAAGGAUGAUACAACUGCAG - 50
Stem-loop(if miRNA) ---AA    AG       CAAC   A
     GAAA  GAUGAUA    UGC G
     ||||  |||||||    |||
     CUUU  CUAUUAU    GCG A
AAUUC    CU       -AGA   U
Stem-loop sequence AAGAAAAGGAUGAUACAACUGCAGAUGCGAGAUAUUAUCUCUUUCCUUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013807794.1
ncRNA:24   GACGUCAACAUAGUAGGAAAAGAA   1
  *****||||*||||||||||||||
targets:1947   AAAAUGUUGGAUCAUCCUUUUCUU   1970

1.0 PREDICTED: Brassica napus serine/threonine-protein kinase KIPK-like (LOC106367926), mRNA serine/threonine-protein kinase KIPK-like(LOC106367926) coding protein psRNATarget