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BaseInfo

ncRNA ID	novel_bna_miR1072
Species	Brassica napus
Class	miRNA
Genome position	ChrA5:17188763-17188851 [+]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR1363496;SRR1363495
Length	20
Mature sequence(if miRNA)	1 - CGACAGAAAAGAGUGAGCAC - 20
Stem-loop(if miRNA)	--C    -   A  A        A  U     CCCUUUUU  U     G    GACA GAA AG GUGAGCAC CA GGCUU        UC AGCAU C    |||| ||| || |||||||| || |||||        || |||||    CUGU CUU UC CACUCGUG GU UCGAA        AG UCGUA U CCU    U   C  C        C  C     --------  C     C
Stem-loop sequence	CGACAGAAAAGAGUGAGCACACAUGGCUUCCCUUUUUUCUAGCAUGCUCAUGCUCGAAAGCUCUGCGUGCUCACCCUCUUCUUGUCUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013817009.1	ncRNA:20   CACGAGUGAGAAAAGACAGC   1   ||*||*|||||||||||||| targets:67   GUCCUGACUCUUUUCUGUCG   86 Target Full Sequence	2.0	PREDICTED: Brassica napus uncharacterized LOC106376877 (LOC106376877), transcript variant X2, mRNA	uncharacterized LOC106376877(LOC106376877)	coding protein	psRNATarget
XM_013817009.1	ncRNA:20   CACGAGUGAGAAAAGACAGC   1   **|||*|||||||||||||| targets:17   UGGCUAACUCUUUUCUGUCG   36 Target Full Sequence	2.0	PREDICTED: Brassica napus uncharacterized LOC106376877 (LOC106376877), transcript variant X2, mRNA	uncharacterized LOC106376877(LOC106376877)	coding protein	psRNATarget
XM_013817010.1	ncRNA:20   CACGAGUGAGAAAAGACAGC   1   ||*||*|||||||||||||| targets:73   GUCCUGACUCUUUUCUGUCG   92 Target Full Sequence	2.0	PREDICTED: Brassica napus uncharacterized LOC106376877 (LOC106376877), transcript variant X3, mRNA	uncharacterized LOC106376877(LOC106376877)	coding protein	psRNATarget
XM_013817010.1	ncRNA:20   CACGAGUGAGAAAAGACAGC   1   **|||*|||||||||||||| targets:23   UGGCUAACUCUUUUCUGUCG   42 Target Full Sequence	2.0	PREDICTED: Brassica napus uncharacterized LOC106376877 (LOC106376877), transcript variant X3, mRNA	uncharacterized LOC106376877(LOC106376877)	coding protein	psRNATarget
XM_013802457.1	ncRNA:20   CACGAGUGAGAAAAGACAGC   1   |||||||||||||||||*|* targets:302   GUGCUCACUCUUUUCUGCCC   321 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106362581 (LOC106362581), mRNA	uncharacterized LOC106362581(LOC106362581)	coding protein	psRNATarget
XM_013890295.1	ncRNA:20   CACGAGUGAGAAAAGACAGC   1   |||||||||||||||||*|* targets:302   GUGCUCACUCUUUUCUGCCC   321 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106448408 (LOC106448408), mRNA	uncharacterized LOC106448408(LOC106448408)	coding protein	psRNATarget