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BaseInfo

ncRNA ID novel_bna_miR1070
Species Brassica napus
Class miRNA
Genome position ChrA5:9854039-9854207 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363496
Length 24
Mature sequence(if miRNA) 146 - AAUAUGGACUGGGGUUAGAGAUGU - 169
Stem-loop(if miRNA) --     C   A   C                    U       -------------UU   UA     C      --    -       CAU
  AUCUC AAC CCA UUUAUAUUUUACUCCAAAAU GUGAAAA               GAG  AUGAA AAAAAA  AAAG AUUACUC   U
  ||||| ||| ||| |||||||||||||||||||| |||||||               |||  ||||| ||||||  |||| |||||||
  UAGAG UUG GGU AGGUAUAAAAUGAGGUUUUA UAUUUUU               UUC  UACUU UUUUUU  UUUC UAAUGAG   U
UG     A   G   C                    -       UAUCUCCCUUUUUAU   GC     A      AU    G       AUA
Stem-loop sequence AUCUCCAACACCACUUUAUAUUUUACUCCAAAAUUGUGAAAAUUGAGUAAUGAACAAAAAAAAAGAUUACUCCAUUUAUAGAGUAAUGCUUUUAUUUUUUAUUCAUCGCUUUAUUUUUCCCUCUAUUUUUUAUAUUUUGGAGUAAAAUAUGGACUGGGGUUAGAGAUGU