ncRNA ID | novel_bna_miR1069 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA4:20692273-20692438 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363496 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAGGCAUACAUUGGAGCAAAUCU - 24 |
Stem-loop(if miRNA) |
--                                          -                  AAUCAUAC            U   AUUUGCUCCAAUGUAUGCCUCUAUAAUAGAGUUUCUCUAUUU UAGAGGAAAAUAUAGAGG        UUUUUAUCUCUA A   |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        ||||||||||||   UAAACGAGGUUACAUACGGAGAUAUUAUCUCAAGGAGAUAAA AUCUCCUUUUAUAUUUCU        AAAAGUAGAGAU U UC                                          U                  -AAACAAU            U |
Stem-loop sequence | AUUUGCUCCAAUGUAUGCCUCUAUAAUAGAGUUUCUCUAUUUUAGAGGAAAAUAUAGAGGAAUCAUACUUUUUAUCUCUAUAUUUAGAGAUGAAAAUAACAAAUCUUUAUAUUUUCCUCUAUAAAUAGAGGAACUCUAUUAUAGAGGCAUACAUUGGAGCAAAUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013891634.1 |
|
2.5 | PREDICTED: Brassica napus fatty-acid-binding protein 2-like (LOC106449977), mRNA | fatty-acid-binding protein 2-like(LOC106449977) | coding protein | psRNATarget |