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BaseInfo

ncRNA ID novel_bna_miR1068
Species Brassica napus
Class miRNA
Genome position ChrA10:3900616-3900829 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363496
Length 24
Mature sequence(if miRNA) 191 - AGGGUAUAGAAUUUGAGUUUAGGG - 214
Stem-loop(if miRNA) -    --  --   UGG    UGGUUUAAAUUCAAGAUUUAAGGUUUGGGUUUAUGAUUUAAGAUCUAGGGUUUAGAAUUUAGGAUCUAGAGUUUCAAUUUAGGGUAUAU
 UUGG  AU  UUA   UUUA                                                                                         A
 ||||  ||  |||   ||||
 GGAU  GA  UUA   AGAU                                                                                         G
G    UU  GU   ---    AUGGGAUUUUGGGUUUGGAUUUGGGAUUUGAGUUUAGGAUAUGAGAUUUAGGUUUGGGAUAUGGAAUUUUGGAUUUGGGAUUUGGGUUU
Stem-loop sequence UUGGAUUUAUGGUUUAUGGUUUAAAUUCAAGAUUUAAGGUUUGGGUUUAUGAUUUAAGAUCUAGGGUUUAGAAUUUAGGAUCUAGAGUUUCAAUUUAGGGUAUAUAGUUUGGGUUUAGGGUUUAGGUUUUAAGGUAUAGGGUUUGGAUUUAGAGUAUAGGAUUUGAGUUUAGGGUUUAGGUUUGGGUUUUAGGGUAUAGAAUUUGAGUUUAGGG