ncRNA ID | ath-miRf10652-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - GCUGCGAUAGAGUGGUUUUG - NA |
Stem-loop(if miRNA) |
                                 -U  ------------CAUA   A GCACGAUCAAGCUCGGAAGUUCAAAGGUCUUUCACAUC AUGAUAUGAUGCUGCGAUAGAGUGGUUUUGGUG  GU                UCC A                                      C |||||||||||||||||||||||||||||||||  ||                ||| |                                      U UACUAUACUACGACGCUAUCUCACCAAAACCAC  CA                CUA G                                      U                                  UU  CUACUAUACCUCUACU   - CUCAUACCACUACCUUACCCCUAGCUCAUCUUGAAGGU |
Stem-loop sequence | AUGAUAUGAUGCUGCGAUAGAGUGGUUUUGGUGUGUCAUAUCCAAGCACGAUCAAGCUCGGAAGUUCAAAGGUCUUUCACAUCCUUUGGAAGUUCUACUCGAUCCCCAUUCCAUCACCAUACUCGAUCUCAUCUCCAUAUCAUCACUUCACCAAAACCACUCUAUCGCAGCAUCAUAUCAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EF183302.1 |
|
2.0 | Arabidopsis thaliana clone asmbl_5082 unknown mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EF183301.1 |
|
2.0 | Arabidopsis thaliana clone asmbl_5080 unknown mRNA sequence | NA | coding protein | psRNATarget |