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BaseInfo

ncRNA ID	novel_bna_miR1066
Species	Brassica napus
Class	miRNA
Genome position	ChrA4:26816597-26816657 [-]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR1363496;SRR1363495
Length	24
Mature sequence(if miRNA)	38 - AAGAGACGGUUCUUAGAUUUUCUU - 61
Stem-loop(if miRNA)	--                A         UU   AAGAGACGGUUCUUAG UUUUCUUAG  A   |||||||||||||||| |||||||||  A   UUCUCUGUCAAGAAUU AAAAGAAUC  A GA                G         UA
Stem-loop sequence	AAGAGACGGUUCUUAGAUUUUCUUAGUUAAAAUCUAAGAAAAGUUAAGAACUGUCUCUUAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013866365.1	ncRNA:24   UUCUUUUAGAUUCUUGGCAGAGAA   1   |||||||*=||||||||||||||| targets:598   AAGAAAAGUUAAGAACCGUCUCUU   621 Target Full Sequence	2.0	PREDICTED: Brassica napus uncharacterized LOC106425644 (LOC106425644), mRNA	uncharacterized LOC106425644(LOC106425644)	coding protein	psRNATarget
XM_013784436.1	ncRNA:24   UUCUUUUAGAUUCUUGGCAGAGAA   1   *=||=*|||||||||||*|||||| targets:202   UGGAGUAUCUAAGAACCCUCUCUU   225 Target Full Sequence	2.5	PREDICTED: Brassica napus calcium-transporting ATPase 9, plasma membrane-type-like (LOC106345197), mRNA	calcium-transporting ATPase 9, plasma membrane-type-like(LOC106345197)	coding protein	psRNATarget
XM_013839350.1	ncRNA:24   UUCUUUUAGAUUCUUGGCAGAGAA   1   *=||=*|||||||||||*|||||| targets:3039   UGGAGUAUCUAAGAACCCUCUCUU   3062 Target Full Sequence	2.5	PREDICTED: Brassica napus calcium-transporting ATPase 9, plasma membrane-type-like (LOC106398850), mRNA	calcium-transporting ATPase 9, plasma membrane-type-like(LOC106398850)	coding protein	psRNATarget
XM_013862664.1	ncRNA:24   UUCUUUUAGAUUCUUGGCAGAGAA   1   *=||=*|||||||||||*|||||| targets:3224   UGGAGUAUCUAAGAACCCUCUCUU   3247 Target Full Sequence	2.5	PREDICTED: Brassica napus calcium-transporting ATPase 9, plasma membrane-type-like (LOC106421834), mRNA	calcium-transporting ATPase 9, plasma membrane-type-like(LOC106421834)	coding protein	psRNATarget
XM_013784421.1	ncRNA:24   UUCUUUUAGAUUCUUGGCAGAGAA   1   *=||=*|||||||||||*|||||| targets:3213   UGGAGUAUCUAAGAACCCUCUCUU   3236 Target Full Sequence	2.5	PREDICTED: Brassica napus calcium-transporting ATPase 9, plasma membrane-type-like (LOC106345176), mRNA	calcium-transporting ATPase 9, plasma membrane-type-like(LOC106345176)	coding protein	psRNATarget