ncRNA ID | novel_bna_miR1060 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA4:8528986-8529086 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363496 |
Length | 24 |
Mature sequence(if miRNA) | 78 - AGAGUAGAAAAUAGAGUGAUGAAU - 101 |
Stem-loop(if miRNA) |
--GGC                              ACU    AAUC    UUG      UUACUCUAUUUUUUACUUUAAAAUAGAGUA   CUAU    GAGU   A      ||||||||||||||||||||||||||||||   ||||    ||||      AGUGAGAUAAAAGAUGAGAUUUUAUCUCAU   GGUA    CUCG   G UAAGU                              ---    --AC    UUU |
Stem-loop sequence | GGCUUACUCUAUUUUUUACUUUAAAAUAGAGUAACUCUAUAAUCGAGUUUGAGUUUGCUCCAAUGGUACUCUAUUUUAGAGUAGAAAAUAGAGUGAUGAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013823854.1 |
|
3.0 | PREDICTED: Brassica napus protein PNS1-like (LOC106383796), mRNA | protein PNS1-like(LOC106383796) | coding protein | psRNATarget |